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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 19:38:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Schoenobius gigantella genome assembly, chromosome: 15.
OZ012555.1:6075662-6075681
TGTTTGCTATAGGTGACTGTTACCACTTAC6075662CATCAGATGGGCAGTATTTTTTTTTTTTTTTTTTTTTAAAACGTCGCCCC
Carassius carassius genome assembly, chromosome: 15.
OY720482.1:20758232-20758251
GAGTGTGCTAAAGTGTTCTCTCCCAGTGTA20758232AAAATACTGCCCATCTGATGGCAAGCGCGTGGCATGGTGCTGATGACACA
Macaca fuscata fuscata DNA, clone: MSB2-018I11_R, genomic survey sequence.
AG623712.1:510-529
CAGCCTCATGTCAAGCAACCTATAGAACAT510AAAATACTGCCCATCTGATGGCAAAACACAAGTTACTGACATTCTGACTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATCAGATGGGCAGTATTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATCAGATGGGCAGTATTTT | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.177 | 0.169 | search_plus_done; http://172.18.8.135:50400/match?q=CATCAGATGGGCAGTATTTT&k=0&no_gap=0&offset=0&limit=50
0.259 | 0.081 | search_minus_done; http://172.18.8.135:50400/match?q=AAAATACTGCCCATCTGATG&k=0&no_gap=0&offset=0&limit=49
0.260 | 0.002 | cgi_end;

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